From patchwork Thu Jan 10 12:01:39 2019 Content-Type: text/plain; charset="utf-8" MIME-Version: 1.0 Content-Transfer-Encoding: 7bit X-Patchwork-Submitter: Jiang Xin X-Patchwork-Id: 10755613 Return-Path: Received: from mail.wl.linuxfoundation.org (pdx-wl-mail.web.codeaurora.org [172.30.200.125]) by pdx-korg-patchwork-2.web.codeaurora.org (Postfix) with ESMTP id 84E066C5 for ; Thu, 10 Jan 2019 12:05:19 +0000 (UTC) Received: from mail.wl.linuxfoundation.org (localhost [127.0.0.1]) by mail.wl.linuxfoundation.org (Postfix) with ESMTP id 7405220408 for ; Thu, 10 Jan 2019 12:05:19 +0000 (UTC) Received: by mail.wl.linuxfoundation.org (Postfix, from userid 486) id 6886A292CA; Thu, 10 Jan 2019 12:05:19 +0000 (UTC) X-Spam-Checker-Version: SpamAssassin 3.3.1 (2010-03-16) on pdx-wl-mail.web.codeaurora.org X-Spam-Level: X-Spam-Status: No, score=-8.0 required=2.0 tests=BAYES_00,DKIM_SIGNED, DKIM_VALID,DKIM_VALID_AU,FREEMAIL_FROM,MAILING_LIST_MULTI,RCVD_IN_DNSWL_HI autolearn=ham version=3.3.1 Received: from vger.kernel.org (vger.kernel.org [209.132.180.67]) by mail.wl.linuxfoundation.org (Postfix) with ESMTP id 95A9420408 for ; Thu, 10 Jan 2019 12:05:16 +0000 (UTC) Received: (majordomo@vger.kernel.org) by vger.kernel.org via listexpand id S1728181AbfAJMFP (ORCPT ); Thu, 10 Jan 2019 07:05:15 -0500 Received: from mail-pl1-f194.google.com ([209.85.214.194]:45263 "EHLO mail-pl1-f194.google.com" rhost-flags-OK-OK-OK-OK) by vger.kernel.org with ESMTP id S1728088AbfAJMFP (ORCPT ); Thu, 10 Jan 2019 07:05:15 -0500 Received: by mail-pl1-f194.google.com with SMTP id a14so5085577plm.12 for ; Thu, 10 Jan 2019 04:05:14 -0800 (PST) DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=gmail.com; s=20161025; h=from:to:cc:subject:date:message-id:in-reply-to:references :mime-version:content-transfer-encoding; bh=i8Fj7xfYWT+rZ0wVvqk62sVzjz4Lz7Q+q5ZQ7Q4He5U=; b=aotsu58sLiDB2rbOk4jH7thwCl34eCp0j3DT6CZLQE1FUB9wY4Cy9nhlYWjJSZhlTw K9LGxChFx5lTI3LlB1QWY+QmYAAVbOl78wKp7PFY+NGYIxds1P0BPgT1ZVlH0syqib5X hVsguLHEvCvhg12Y2zbEc65sfRBE6sagxuJA5LJgm4ogFQWeaNWKcMa7axWQdEjcM751 WTE7Z3q2RsPv+ASO/J4+cmtrwzjxBOMkkKytoqq8MkpVAtfeVxap4/jYzzrRubA5ov1N NI9PjRIHp3kUSbvpNOqiY3Szcq5PrBQJBe4WYD2aubVlylm74vjaIN9ZMkHqHD4752OK kkQw== X-Google-DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=1e100.net; s=20161025; h=x-gm-message-state:from:to:cc:subject:date:message-id:in-reply-to :references:mime-version:content-transfer-encoding; bh=i8Fj7xfYWT+rZ0wVvqk62sVzjz4Lz7Q+q5ZQ7Q4He5U=; b=LpFcmlxaqmpczGEdrCvTDpF0SUVr5HROzO4k0ZmrzLcr3jmmWlMGf+LrVedl1KPp5q 16fLmj0KTWKL3Z9PIFDZkvYa4L9C866uGRm52bfn9elMVAJ5/jGeiy7yCqza4NYe9aL7 27+pwr4pCaCSrbmGluw9BQY3fRUG6gXKmUORnvZqcyGXkeGPyvyuSjLsNKeTk2TAnQMt AJs/zi9Y4dVvoyaAvwO0zYnsBUVNlvwLhdebHmzyVBY1OZpKulATP/E7eFFWTO78xi3k 8YkjsbahAQc3Urhbm0ncv5W6AB7tX4U0yIP8cNZ18gxs667XqviPKD6P7SFKGc6tYofN o5UA== X-Gm-Message-State: AJcUukdKCUZhZ0dVdIxqZW2QUguC3rzZ8BTGkVbQAyrd6DyXNPxTps3t pHBqTXjTSQ23zjyajpxYKZrqQpm1sJc= X-Google-Smtp-Source: ALg8bN4PRYqtisrDpcJeqo5uuThfndMWHeSisNrDC2XIRSbHydpROqMrePHSsHif+BQpsju9mhf5Wg== X-Received: by 2002:a17:902:50e:: with SMTP id 14mr9952021plf.141.1547121914047; Thu, 10 Jan 2019 04:05:14 -0800 (PST) Received: from GotGit.hz.ali.com ([106.11.34.204]) by smtp.gmail.com with ESMTPSA id b2sm137189403pfm.3.2019.01.10.04.05.11 (version=TLS1_2 cipher=ECDHE-RSA-AES128-GCM-SHA256 bits=128/128); Thu, 10 Jan 2019 04:05:13 -0800 (PST) From: Jiang Xin To: Junio C Hamano , Git List , =?utf-8?q?SZEDER_G=C3=A1bor?= , Sun Chao Cc: Johannes Sixt , Jiang Xin Subject: [PATCH v5 2/5] pack-redundant: new algorithm to find min packs Date: Thu, 10 Jan 2019 20:01:39 +0800 Message-Id: <20190110120142.22271-3-worldhello.net@gmail.com> X-Mailer: git-send-email 2.20.1.101.gc01fadde4e In-Reply-To: <20190109164731.GJ4673@szeder.dev> References: <20190109164731.GJ4673@szeder.dev> MIME-Version: 1.0 Sender: git-owner@vger.kernel.org Precedence: bulk List-ID: X-Mailing-List: git@vger.kernel.org X-Virus-Scanned: ClamAV using ClamSMTP From: Sun Chao When calling `git pack-redundant --all`, if there are too many local packs and too many redundant objects within them, the too deep iteration of `get_permutations` will exhaust all the resources, and the process of `git pack-redundant` will be killed. The following script could create a repository with too many redundant packs, and running `git pack-redundant --all` in the `test.git` repo will die soon. #!/bin/sh repo="$(pwd)/test.git" work="$(pwd)/test" i=1 max=199 if test -d "$repo" || test -d "$work"; then echo >&2 "ERROR: '$repo' or '$work' already exist" exit 1 fi git init -q --bare "$repo" git --git-dir="$repo" config gc.auto 0 git --git-dir="$repo" config transfer.unpackLimit 0 git clone -q "$repo" "$work" 2>/dev/null while :; do cd "$work" echo "loop $i: $(date +%s)" >$i git add $i git commit -q -sm "loop $i" git push -q origin HEAD:master printf "\rCreate pack %4d/%d\t" $i $max if test $i -ge $max; then break; fi cd "$repo" git repack -q if test $(($i % 2)) -eq 0; then git repack -aq pack=$(ls -t $repo/objects/pack/*.pack | head -1) touch "${pack%.pack}.keep" fi i=$((i+1)) done printf "\ndone\n" To get the `min` unique pack list, we can replace the iteration in `minimize` function with a new algorithm, and this could solve this issue: 1. Get the unique and non_uniqe packs, add the unique packs to the `min` list. 2. Remove the objects of unique packs from non_unique packs, then each object left in the non_unique packs will have at least two copies. 3. Sort the non_unique packs by the objects' size, more objects first, and add the first non_unique pack to `min` list. 4. Drop the duplicated objects from other packs in the ordered non_unique pack list, and repeat step 3. Original PR and discussions: https://github.com/jiangxin/git/pull/25 Signed-off-by: Sun Chao Signed-off-by: Jiang Xin Signed-off-by: Junio C Hamano --- builtin/pack-redundant.c | 109 ++++++++++++++++++++++++--------------- 1 file changed, 68 insertions(+), 41 deletions(-) diff --git a/builtin/pack-redundant.c b/builtin/pack-redundant.c index cf9a9aabd4..3655cc7dc6 100644 --- a/builtin/pack-redundant.c +++ b/builtin/pack-redundant.c @@ -421,14 +421,52 @@ static inline off_t pack_set_bytecount(struct pack_list *pl) return ret; } +static int cmp_pack_list_reverse(const void *a, const void *b) +{ + struct pack_list *pl_a = *((struct pack_list **)a); + struct pack_list *pl_b = *((struct pack_list **)b); + size_t sz_a = pl_a->all_objects->size; + size_t sz_b = pl_b->all_objects->size; + + if (sz_a == sz_b) + return 0; + else if (sz_a < sz_b) + return 1; + else + return -1; +} + +/* Sort pack_list, greater size of all_objects first */ +static void sort_pack_list(struct pack_list **pl) +{ + struct pack_list **ary, *p; + int i; + size_t n = pack_list_size(*pl); + + if (n < 2) + return; + + /* prepare an array of packed_list for easier sorting */ + ary = xcalloc(n, sizeof(struct pack_list *)); + for (n = 0, p = *pl; p; p = p->next) + ary[n++] = p; + + QSORT(ary, n, cmp_pack_list_reverse); + + /* link them back again */ + for (i = 0; i < n - 1; i++) + ary[i]->next = ary[i + 1]; + ary[n - 1]->next = NULL; + *pl = ary[0]; + + free(ary); +} + + static void minimize(struct pack_list **min) { - struct pack_list *pl, *unique = NULL, - *non_unique = NULL, *min_perm = NULL; - struct pll *perm, *perm_all, *perm_ok = NULL, *new_perm; - struct llist *missing; - off_t min_perm_size = 0, perm_size; - int n; + struct pack_list *pl, *unique = NULL, *non_unique = NULL; + struct llist *missing, *unique_pack_objects; pl = local_packs; while (pl) { @@ -446,49 +484,37 @@ static void minimize(struct pack_list **min) pl = pl->next; } + *min = unique; + /* return if there are no objects missing from the unique set */ if (missing->size == 0) { - *min = unique; free(missing); return; } - /* find the permutations which contain all missing objects */ - for (n = 1; n <= pack_list_size(non_unique) && !perm_ok; n++) { - perm_all = perm = get_permutations(non_unique, n); - while (perm) { - if (is_superset(perm->pl, missing)) { - new_perm = xmalloc(sizeof(struct pll)); - memcpy(new_perm, perm, sizeof(struct pll)); - new_perm->next = perm_ok; - perm_ok = new_perm; - } - perm = perm->next; - } - if (perm_ok) - break; - pll_free(perm_all); - } - if (perm_ok == NULL) - die("Internal error: No complete sets found!"); - - /* find the permutation with the smallest size */ - perm = perm_ok; - while (perm) { - perm_size = pack_set_bytecount(perm->pl); - if (!min_perm_size || min_perm_size > perm_size) { - min_perm_size = perm_size; - min_perm = perm->pl; - } - perm = perm->next; - } - *min = min_perm; - /* add the unique packs to the list */ - pl = unique; + unique_pack_objects = llist_copy(all_objects); + llist_sorted_difference_inplace(unique_pack_objects, missing); + + /* remove unique pack objects from the non_unique packs */ + pl = non_unique; while (pl) { - pack_list_insert(min, pl); + llist_sorted_difference_inplace(pl->all_objects, unique_pack_objects); pl = pl->next; } + + while (non_unique) { + /* sort the non_unique packs, greater size of all_objects first */ + sort_pack_list(&non_unique); + if (non_unique->all_objects->size == 0) + break; + + pack_list_insert(min, non_unique); + + for (pl = non_unique->next; pl && pl->all_objects->size > 0; pl = pl->next) + llist_sorted_difference_inplace(pl->all_objects, non_unique->all_objects); + + non_unique = non_unique->next; + } } static void load_all_objects(void) @@ -603,7 +629,7 @@ static void load_all(void) int cmd_pack_redundant(int argc, const char **argv, const char *prefix) { int i; - struct pack_list *min, *red, *pl; + struct pack_list *min = NULL, *red, *pl; struct llist *ignore; struct object_id *oid; char buf[GIT_MAX_HEXSZ + 2]; /* hex hash + \n + \0 */ @@ -664,6 +690,7 @@ int cmd_pack_redundant(int argc, const char **argv, const char *prefix) pl = local_packs; while (pl) { llist_sorted_difference_inplace(pl->unique_objects, ignore); + llist_sorted_difference_inplace(pl->all_objects, ignore); pl = pl->next; }